PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028547960.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 666aa MW: 76259.6 Da PI: 6.9406 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 108 | 1.1e-33 | 65 | 139 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++v s ++++vg+kktLv+y+grap+g++tdWvmheyrl XP_028547960.1 65 SKDLEWYFFSPRDRKYPNGSRTNRATQAGYWKATGKDRKVNS-QKRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 139 4567**************************************.9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 666 aa Download sequence |
MKRDAQINKL QKSKAAVTIN SKPSYNFLIS TKHQIKHNDE LHFSYLTNLI YFFIDILSEK 60 SFLPSKDLEW YFFSPRDRKY PNGSRTNRAT QAGYWKATGK DRKVNSQKRA VGMKKTLVYY 120 RGRAPHGSRT DWVMHEYRLD ERECEIANGL QDAYALCRVF KKSEPGPKII EHYGAPCEEH 180 KQWMLNEHSS TMTDLSPDGI GDYLESSNYH FQPSDCPQTM IQSSFEASNS WMQFLTDEAL 240 SSTTATFQNT SFSYVPSKVD VALECARLQQ RFTMPSLEVE DYSLLHMADP TILHSTNYSQ 300 NTTHGEDILH ELLSVASASQ ELINNPNFHE DMWAARITPH FNESFSTLIE SGDAVGSSKF 360 IAKSCGLEEQ STFVDISELE DEFKEQTKGK NLRDVKKLQE NLLEMNKEVQ KKDCSSNPHT 420 EHICDARETN QGNFTYESTE IDDKPIYSQS QEDNFSIGFI NIQKDFNQDE HHHLDNAGSP 480 SFDVYHEMIQ FNQGLLMSSQ TVSKTFFHHI APANKINIHL NPINFMVDKY ESSERARSSV 540 SFFENFKNFF CNKLKKGSIF GRGGANGMLG LIEVLLASSF YHGGLLEQSN LSREDMPSRV 600 AAIQAGGIKL TSYDGRKKAE NMKRMKWNDG KKFWFPKIRG KSISRMLLNG NLLPWVSMLQ 660 PSHHSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 4e-87 | NAC family protein |