PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028547960.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 666aa    MW: 76259.6 Da    PI: 6.9406
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028547960.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1081.1e-336513953128
             NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++v s ++++vg+kktLv+y+grap+g++tdWvmheyrl
  XP_028547960.1  65 SKDLEWYFFSPRDRKYPNGSRTNRATQAGYWKATGKDRKVNS-QKRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 139
                     4567**************************************.9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 666 aa     Download sequence    
MKRDAQINKL QKSKAAVTIN SKPSYNFLIS TKHQIKHNDE LHFSYLTNLI YFFIDILSEK  60
SFLPSKDLEW YFFSPRDRKY PNGSRTNRAT QAGYWKATGK DRKVNSQKRA VGMKKTLVYY  120
RGRAPHGSRT DWVMHEYRLD ERECEIANGL QDAYALCRVF KKSEPGPKII EHYGAPCEEH  180
KQWMLNEHSS TMTDLSPDGI GDYLESSNYH FQPSDCPQTM IQSSFEASNS WMQFLTDEAL  240
SSTTATFQNT SFSYVPSKVD VALECARLQQ RFTMPSLEVE DYSLLHMADP TILHSTNYSQ  300
NTTHGEDILH ELLSVASASQ ELINNPNFHE DMWAARITPH FNESFSTLIE SGDAVGSSKF  360
IAKSCGLEEQ STFVDISELE DEFKEQTKGK NLRDVKKLQE NLLEMNKEVQ KKDCSSNPHT  420
EHICDARETN QGNFTYESTE IDDKPIYSQS QEDNFSIGFI NIQKDFNQDE HHHLDNAGSP  480
SFDVYHEMIQ FNQGLLMSSQ TVSKTFFHHI APANKINIHL NPINFMVDKY ESSERARSSV  540
SFFENFKNFF CNKLKKGSIF GRGGANGMLG LIEVLLASSF YHGGLLEQSN LSREDMPSRV  600
AAIQAGGIKL TSYDGRKKAE NMKRMKWNDG KKFWFPKIRG KSISRMLLNG NLLPWVSMLQ  660
PSHHSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.14e-87NAC family protein