PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028547785.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 88aa MW: 10340.8 Da PI: 7.3422 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 104.5 | 1.4e-32 | 5 | 88 | 1 | 85 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppGfrFhPtdeel+v+yL++++ + ++++ +i++++iyk++Pw+Lp k + +e ewyfF++rd+ky++g r+nrat+sgyWka XP_028547785.1 5 LPPGFRFHPTDEELIVYYLRNQAMSLPCPA-PIIPQLNIYKFDPWELPGKSELSEGEWYFFTPRDRKYPNGLRPNRATASGYWKA 88 79***************************9.88***************88888999***************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MGYELPPGFR FHPTDEELIV YYLRNQAMSL PCPAPIIPQL NIYKFDPWEL PGKSELSEGE 60 WYFFTPRDRK YPNGLRPNRA TASGYWKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 3e-49 | NAC family protein |