PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028547600.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 98aa MW: 11176.2 Da PI: 10.3166 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 103.3 | 1.6e-32 | 2 | 86 | 12 | 95 |
NF-YC 12 katdfknhelPlarikkilkad.edvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 ++ dfk + l ikki+kad +dv+mi+aeaP++l++ace+fi+elt r+w ha +nkrr l+k+diaa+++rt+++dfl + XP_028547600.1 2 QTRDFKYIASLLLVIKKIMKADrKDVRMIAAEAPIVLTRACEMFIFELTRRAWAHAVQNKRRILQKNDIAAVLARTNMYDFLAES 86 56789988888999*******9569*********************************************************876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
MQTRDFKYIA SLLLVIKKIM KADRKDVRMI AAEAPIVLTR ACEMFIFELT RRAWAHAVQN 60 KRRILQKNDI AAVLARTNMY DFLAESMEDI GGPSSTTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 6e-33 | NF-YC family protein |