PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028547576.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 262aa    MW: 29157.6 Da    PI: 6.5143
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028547576.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.1e-1761111155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr++  +g+WvAeIr+p+    r  r +lg++ t  +Aa a+++a+++l+g
  XP_028547576.1  61 CKYRGVRQRT-WGKWVAEIREPR----RgCRLWLGTYNTSLDAALAYDEAARALYG 111
                     79*****999.**********83....46***********************9987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MKKRRRNRFT GTSCVAEILS KWKDQNNQLH TLNTQRVRKV PAKGSKKGCM TGKGGPENSH  60
CKYRGVRQRT WGKWVAEIRE PRRGCRLWLG TYNTSLDAAL AYDEAARALY GSYARVNLPE  120
SVVDSDAQQC KRPKSETLES TTSSETALEA DNLKPVAVKE EIKNIGSQPS SEDPLSTDSR  180
NPVLTEEPVE EMPFDMFHID EILGFANGCE DAVGSSLHSS GSNLQSPSPV QKADTMCWSL  240
DQMDYGFPDL GFLDPSFFSD LP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.14e-35ERF family protein