PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028547574.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

ERF

Protein Properties

Length: 279aa MW: 31067.1 Da PI: 6.5134

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028547574.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.7	1.3e-17	78	128	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p+ r r +lg++ t +Aa a+++a+++l+g XP_028547574.1 78 CKYRGVRQRT-WGKWVAEIREPR----RgCRLWLGTYNTSLDAALAYDEAARALYG 128 79***999.******83....46*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MVASCEIELI RPMKLLLVKK RRRNRFTGTS CVAEILSKWK DQNNQLHTLN TQRVRKVPAK 60 GSKKGCMTGK GGPENSHCKY RGVRQRTWGK WVAEIREPRR GCRLWLGTYN TSLDAALAYD 120 EAARALYGSY ARVNLPESVV DSDAQQCKRP KSETLESTTS SETALEADNL KPVAVKEEIK 180 NIGSQPSSED PLSTDSRNPV LTEEPVEEMP FDMFHIDEIL GFANGCEDAV GSSLHSSGSN 240 LQSPSPVQKA DTMCWSLDQM DYGFPDLGFL DPSFFSDLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40340.1	2e-34	ERF family protein