PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020705927.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 284aa MW: 32232.5 Da PI: 7.2644 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.2 | 2.4e-51 | 11 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhP+d+el++eyL +++++ + + ++ +vd++++ePwdLp+++ + kewyfFs +dkky+tg+r+nrat+sgyWkatgkd++ XP_020705927.1 11 LPPGFRFHPRDDELICEYLSRRASAAAdgaeFYGFPAMVDVDLNRCEPWDLPETACVRGKEWYFFSLKDKKYSTGQRTNRATASGYWKATGKDRQ 105 79********************988885544333457***************7767789************************************ PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v++ kgelvgl+ktLvfy+grapkg+kt+Wvmhe+r+ XP_020705927.1 106 VIR-KGELVGLRKTLVFYHGRAPKGKKTQWVMHEFRM 141 **9.999****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MSILSMVEAK LPPGFRFHPR DDELICEYLS RRASAAADGA EFYGFPAMVD VDLNRCEPWD 60 LPETACVRGK EWYFFSLKDK KYSTGQRTNR ATASGYWKAT GKDRQVIRKG ELVGLRKTLV 120 FYHGRAPKGK KTQWVMHEFR MVSSRASDSP NFSFKEDWVL CRVFYKRRPL CPRISSETCE 180 EEETGSSSLP PLTESHITSC NLVPLNNLEG LEQVPCFSSF STSQESPGLL SSSSFNSTVS 240 CDAKDLKAML SQLSKIEENQ QINESCFSES EIRTLWNPFA SFLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12977.1 | 2e-79 | NAC family protein |