PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020705822.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 251aa MW: 28723.6 Da PI: 9.744 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.8 | 1.5e-19 | 103 | 153 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 +++GVr+++ +g+W+AeIrdp + kr++lg+f+taeeAa ++ a+ kl+ge XP_020705822.1 103 RFRGVRRRP-WGKWAAEIRDP-----HrrKRVWLGTFDTAEEAAVVYDSAAVKLKGE 153 79*******.**********6.....226*************************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MEIPSRIHHL DFPDLPVKFS EHILTKTRKM ISAGKTRGLR RRLVRIVFAD EDATDSSSSD 60 EDNVPFTRRR VKRHVHEIGF EIGPRFRRPT PAKRRAEDRD PKRFRGVRRR PWGKWAAEIR 120 DPHRRKRVWL GTFDTAEEAA VVYDSAAVKL KGENALTNFP HGKLQSPAEA GSTEKSVKET 180 SPPFASPTSV LRIAVEQTPF DCLGYGDVDA FGLSVEPPLY LTEFSLPKRQ CWEMEFGDFN 240 AEDFSLEVVT F |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 94 | 111 | RRAEDRDPKRFRGVRRRP |
2 | 108 | 127 | RRRPWGKWAAEIRDPHRRKR |
3 | 124 | 151 | RRKRVWLGTFDTAEEAAVVYDSAAVKLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27950.1 | 4e-36 | ERF family protein |