PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020705610.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 487aa    MW: 54070.8 Da    PI: 5.0724
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020705610.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.59e-09127102128
             NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                     +kktLvf+ grap+g +t W+mheyr 
  XP_020705610.1   1 MKKTLVFHCGRAPNGLRTCWIMHEYRT 27 
                     8************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    
MKKTLVFHCG RAPNGLRTCW IMHEYRTTEP EFDCGEQGGY MLYRLFKKQE GKGLKCNDDD  60
MVNRGYSQTN SKSSPADIED CSATVEQSST DLDSCGEQSL NQIIKEQPAA KLRRLAEKVD  120
CSRDSTWEPK DGHCNAFANV GVANNNADVI GPTVDPLISI VEQFGEPYNE QTIEQSFPNV  180
DSPIPYSDWS MYNMSYEPDP IDEVLKAMLV RQDKDGEDDA QLILADELLA RPIIGNSQGF  240
ARESVSSSEL ESQKGGAYTE LKNLQASIPH INSSHETSAA GLRYAVLCDQ TMFPQYDSVG  300
YDIFSTNSNA MSLQGDFIVS SDRIIQETVT GNFDGPNLTV NSIRSESAKQ LQSNSMATKQ  360
GQAKRRLRLQ KKMSVGVPQS REAELSNGNG DHRMKKEITE MMEESQLAIG EENVEKFKDI  420
SIHGKAKLRL TPKLSYGSSG TLKSTSFSPS NVWKAGSMIA YMRRLALLVV LALLFVFLWR  480
SVAVHVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.23e-13NAC family protein