PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020705067.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 231aa MW: 26844.4 Da PI: 7.1942 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 174.2 | 3.8e-54 | 7 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 l pGfrFhPtdee++++yL +kv +++++ +i e +++ePwdLp k++ +ekewyfF+krd+ky+tg r+nrat+sgyWkatgkdke+++ XP_020705067.2 7 LLPGFRFHPTDEEIITHYLLEKVIDQSFKS-IAIGEGSFNECEPWDLPGKANMGEKEWYFFCKRDRKYPTGMRTNRATSSGYWKATGKDKEIFKG 100 579************************999.88***************99999****************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg lvg+kktLvfy+grap+g kt+Wvmheyrle XP_020705067.2 101 KGVLVGMKKTLVFYSGRAPRGMKTKWVMHEYRLE 134 ********************************85 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MDDSLHLLPG FRFHPTDEEI ITHYLLEKVI DQSFKSIAIG EGSFNECEPW DLPGKANMGE 60 KEWYFFCKRD RKYPTGMRTN RATSSGYWKA TGKDKEIFKG KGVLVGMKKT LVFYSGRAPR 120 GMKTKWVMHE YRLEGKYQYN NLSTPHQDEW VVCKVYNKKD TKISTGQQEV AERMNSSFVD 180 DLLVDNPDQL PPLTNSPFFY NSRDIVDYNS FDLHSPSLDF GPLDHRLTLI F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18270.2 | 9e-90 | NAC family protein |