PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020704660.2
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 142aa    MW: 15529.6 Da    PI: 5.3074
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020704660.2genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.63.2e-105877322
                    -SS-EEEEEEE--TT-SS-E CS
            WRKY  3 DgynWrKYGqKevkgsefpr 22
                    D ++WrKYGqK++kgs++pr
  XP_020704660.2 58 DSWAWRKYGQKPIKGSPYPR 77
                    99*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MYAKEEPGTS PELSPYLDPE PSPKKSRRSV QKRVVSLPVP EAEGPRLKSG GEAAPPPDSW  60
AWRKYGQKPI KGSPYPRWLS ITCHLIFFWV DEEEDALFAG LGELPEYSVI SRRGFLDLQI  120
RGGEDGKLCG LEAAAAACGS NG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.11e-22WRKY family protein