PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020704404.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | bHLH | ||||||||
Protein Properties | Length: 196aa MW: 20728.5 Da PI: 9.0826 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44 | 3.9e-14 | 21 | 68 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r+h+e+Er+RR+riN +++Lr+llP+a +++Ka+ L ++v+++++L XP_020704404.1 21 CRSHSEAERKRRQRINGHLATLRSLLPSA-----SRMDKATLLGEVVRHVREL 68 789*************************9.....7***************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
METDGAVLPI AASCSPAVRS CRSHSEAERK RRQRINGHLA TLRSLLPSAS RMDKATLLGE 60 VVRHVRELRG IADDVATSAV PSEGDEVGVD DDVAEGGGGR VRAWVCCADR PGLMAELSQA 120 VGSARAKAVR AEMTTVGGRT RSVLELELLG GPTPIGGEAR SAIQAALREV LLADRTGSTD 180 RFKRQRLSTR FGTSAL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 28 | 33 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 5e-27 | bHLH family protein |