PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020704392.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 269aa MW: 31452.3 Da PI: 4.8762

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020704392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	162.7	1.4e-50	29	156	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv++yL++k+e++++++ e+ike diyk++Pw+L ++ +ekewyfF+ r++ky+++ r+nr+t sg+Wkatg d++++s+ XP_020704392.1 29 LPGFRFHPTDEELVSFYLRRKAERRPISM-EIIKERDIYKYDPWELTRAGILGEKEWYFFCLRERKYRNSIRPNRVTGSGFWKATGIDRPIYSSd 122 69*************************.99**********954445899**********************************97 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g+l+glkk+Lv+y+g+a kg+ktdW+mheyrl XP_020704392.1 123 nSGHLIGLKKSLVYYQGSAGKGTKTDWMMHEYRL 156 77888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MSGYMKEMIC DGVEEEGEIE LEEEEEVVLP GFRFHPTDEE LVSFYLRRKA ERRPISMEII 60 KERDIYKYDP WELTRAGILG EKEWYFFCLR ERKYRNSIRP NRVTGSGFWK ATGIDRPIYS 120 SDNSGHLIGL KKSLVYYQGS AGKGTKTDWM MHEYRLPSNP NCIQAAEIWT ICRIIKRNGS 180 LKKYKQQLSW KEANESLDSS SKSNSFESNS GEEKKNLGGC YFQLDGSYGG SRMEENNLNE 240 IFEEGNWGEI DRMVDYMVEA ATQYDFVYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	1e-75	NAC family protein