PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020704280.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ZF-HD
Protein Properties Length: 273aa    MW: 28909.9 Da    PI: 7.5366
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020704280.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1031.9e-3255109358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     +vrY+eClkNhA+s+GghavDGCgEf+p+ geeg+ +al+CaAC CHRnFHR+eve
  XP_020704280.1  55 GVRYRECLKNHAVSIGGHAVDGCGEFLPA-GEEGSLDALRCAACSCHRNFHRKEVE 109
                     79**************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDFDDHDEAE EEMGLSNYEP GLGNSGREKP TVTGAGAAGV SDPGGGSSNR KPTAGVRYRE  60
CLKNHAVSIG GHAVDGCGEF LPAGEEGSLD ALRCAACSCH RNFHRKEVEG GGEPSPGSSA  120
AAAAAAAGFH SPFSPYYRTP AGYLHHHHQH QYAAAAAAAA AAHHHHRPVP LALPSTSGGG  180
HSREELEDVS NPMSFGFGGA ATGPSSSSGK KRFRTKFTQE QKDKMLAFAE AVGWRLQKHD  240
EAAVQQFCNE TSVKRHVLKV WMHNNKHTLG KKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65410.14e-53ZF-HD family protein