PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020704127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 138aa MW: 14972.2 Da PI: 8.4844 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.8 | 3.1e-09 | 46 | 79 | 2 | 38 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 y+GVr+ + g+++AeIrdp ++g r++lg+f t XP_020704127.1 46 NYRGVRQQP-LGKFAAEIRDPAKDG--VRIWLGTFET 79 59*******.8*********98886..********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MVIYLTLHDA FRGDWLPEGG SATAFVLPPP VKPDSPDIGA PAKGKNYRGV RQQPLGKFAA 60 EIRDPAKDGV RIWLGTFETR GRKGIIAEFK ELASSLPKEM VAMQSELEKL KDFSSEIHWL 120 ASSSAVFICI IATGGNAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 1e-20 | ERF family protein |