PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703835.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 237aa MW: 27221 Da PI: 10.5461 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.2 | 5.1e-11 | 107 | 129 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ldDgy+WrKYGqK vk+s +pr XP_020703835.1 107 LDDGYRWRKYGQKAVKNSIHPRE 129 59*******************96 PP | |||||||
2 | WRKY | 102.1 | 3.2e-32 | 157 | 215 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+ XP_020703835.1 157 LDDGYRWRKYGQKAVKNSIHPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGVHNHP 215 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MEQYLEAGDL PPLFPDHNYF SPSPLLPSDF FHQEAALPPS ALTPPLLLPN GISASLMEER 60 EKLREEGEGN VNGVGERREK RKAVSGRGKK VSRPRFAFQT RSANDILDDG YRWRKYGQKA 120 VKNSIHPREK RKAVSGRGKK VSRPRFAFQT RSANDILDDG YRWRKYGQKA VKNSIHPRSY 180 YRCTHHTCNV KKQVQRLSKD TSIVVTTYEG VHNHPCEKLM EALSPLLKQI QFLTTRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46130.1 | 1e-55 | WRKY family protein |