PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020703744.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 320aa    MW: 36494.9 Da    PI: 7.1956
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020703744.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.82.6e-50231482128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     +pGfrFhPt+eel+ +yL++kvegk++++ + i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + s++
  XP_020703744.1  23 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-DLITFLDLYRYDPWELPSLAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSEN 116
                     79***************************.99***************8777899***************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++ +glkktLvfy+g+apkg +t+W+m+eyrl
  XP_020703744.1 117 SRPIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 148
                     ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MAIAAAMSRD EAEKDAHEND LVMPGFRFHP TEEELIEFYL RRKVEGKRFN VDLITFLDLY  60
RYDPWELPSL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS GYWKATGADR MIRSENSRPI  120
GLKKTLVFYS GKAPKGIRTS WIMNEYRLPQ PETDRNYKTE ISLCRVYKRP GVEDHHRSSN  180
KISSKASSSS TTTPDKNLRQ INPLPIGYLQ SAAGEGPSPS SELGDCKCTE EAMYASSTTI  240
PIVSLSSTPM EEEGSSQYHS QPPIHSSSDT SVHELSRIVS YLNQPQLLPV NQLPPLLSNK  300
LWEWNDPFSD AARDYSVNFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.21e-105NAC family protein