PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020703590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 199aa MW: 21760.5 Da PI: 6.7184 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 24.4 | 6.1e-08 | 4 | 34 | 5 | 35 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 +C+ +e+ ++ lfC ++ lC+ C ++ Hk XP_020703590.1 4 ICDVCESAPAVLFCSADEAALCRPCDDKVHK 34 8***************************995 PP | |||||||
2 | zf-B_box | 22.5 | 2.4e-07 | 52 | 86 | 2 | 36 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 e ++C+ +e ++ ++Ce +++ lC +C + H g XP_020703590.1 52 EVPRCDICEVSPAFFYCEIDGSSLCLQCDTIVHVG 86 789******999*****************999955 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 199 aa Download sequence |
MRIICDVCES APAVLFCSAD EAALCRPCDD KVHKCNKLAG RHVRVGLADP SEVPRCDICE 60 VSPAFFYCEI DGSSLCLQCD TIVHVGGKRT HARYLLLRQR VEGQAEDSSL QNKYHSANHM 120 DLDHLSHSVV REKQQNHEVS PPTLIANNDH HGNSDSKMID LNKRPSRTGG QDSNMQGAGA 180 SLTTTIVAPV GSLTRDAEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38960.1 | 7e-68 | DBB family protein |