PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703589.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | DBB | ||||||||
Protein Properties | Length: 205aa MW: 22434.2 Da PI: 6.8784 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 24.3 | 6.3e-08 | 4 | 34 | 5 | 35 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 +C+ +e+ ++ lfC ++ lC+ C ++ Hk XP_020703589.1 4 ICDVCESAPAVLFCSADEAALCRPCDDKVHK 34 8***************************995 PP | |||||||
2 | zf-B_box | 22.4 | 2.5e-07 | 52 | 86 | 2 | 36 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg 36 e ++C+ +e ++ ++Ce +++ lC +C + H g XP_020703589.1 52 EVPRCDICEVSPAFFYCEIDGSSLCLQCDTIVHVG 86 789******999*****************999955 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MRIICDVCES APAVLFCSAD EAALCRPCDD KVHKCNKLAG RHVRVGLADP SEVPRCDICE 60 VSPAFFYCEI DGSSLCLQCD TIVHVGGKRT HARYLLLRQR VEFVGNKQGQ AEDSSLQNKY 120 HSANHMDLDH LSHSVVREKQ QNHEVSPPTL IANNDHHGNS DSKMIDLNKR PSRTGGQDSN 180 MQGAGASLTT TIVAPVGSLT RDAEK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38960.1 | 4e-69 | DBB family protein |