PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020703541.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 454aa MW: 51181.7 Da PI: 8.2384

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020703541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.9e-09	253	290	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk+ gLt +qV++WF N R + XP_020703541.1 253 FEHflHPYPTDVDKQMLAKQAGLTRNQVSNWFINARVR 290 664459******************************88 PP
2	BELL	95.1	6.1e-31	126	194	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + q kka+L+s+++eV++rY+ y++q+q vi sFe+vagl +a+pY+slAl+ +S+hFrcLk+++++q+ XP_020703541.1 126 DQQWKKARLISMIDEVCRRYRIYYQQVQNVITSFEMVAGLRTAAPYVSLALNSMSKHFRCLKNMMTNQL 194 5799*************************************************************9996 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MSSSDDPFLL HHHNLLYHVP QHSRREKLRF QTDSSSLPNP MAHFTAGTGL LQIQPPQGSF 60 SLTLSPAAAL LPLGPFTGYA AVLNRSRFLD PARQLLEEVC EVAGGEPLAG DPPEVMSLDY 120 EVGPDDQQWK KARLISMIDE VCRRYRIYYQ QVQNVITSFE MVAGLRTAAP YVSLALNSMS 180 KHFRCLKNMM TNQLSLTNKD SGKEGFSRTE ISGFGMCLQQ DGNNLDSYRQ PHAWRPQRGL 240 PERAIAVLRA WLFEHFLHPY PTDVDKQMLA KQAGLTRNQV SNWFINARVR LWKPMVEEIH 300 NLEMRQQQKT VVPNNKNQIS HNKQASKPSS STATSSSTQP PQNSFIQRNQ NPPSSRSLNN 360 ELDYIAHHIE EPYKYAYNDF SSQDVGRNTG STVSLTLGLH QNSGVRLPEP LPLNVARRFG 420 LEDCNDAYVV GAFEGQDRRF GKDIGGHLLH DFVG

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MSSSDDPFLL HHHNLLYHVP QHSRREKLRF QTDSSSLPNP MAHFTAGTGL LQIQPPQGSF  60
SLTLSPAAAL LPLGPFTGYA AVLNRSRFLD PARQLLEEVC EVAGGEPLAG DPPEVMSLDY  120
EVGPDDQQWK KARLISMIDE VCRRYRIYYQ QVQNVITSFE MVAGLRTAAP YVSLALNSMS  180
KHFRCLKNMM TNQLSLTNKD SGKEGFSRTE ISGFGMCLQQ DGNNLDSYRQ PHAWRPQRGL  240
PERAIAVLRA WLFEHFLHPY PTDVDKQMLA KQAGLTRNQV SNWFINARVR LWKPMVEEIH  300
NLEMRQQQKT VVPNNKNQIS HNKQASKPSS STATSSSTQP PQNSFIQRNQ NPPSSRSLNN  360
ELDYIAHHIE EPYKYAYNDF SSQDVGRNTG STVSLTLGLH QNSGVRLPEP LPLNVARRFG  420
LEDCNDAYVV GAFEGQDRRF GKDIGGHLLH DFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	8e-76	TALE family protein