PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703498.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 232aa MW: 25715.9 Da PI: 8.3404 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.2 | 5.4e-20 | 116 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ r r +lg+f taeeAa+a+++a+ +++g XP_020703498.1 116 QYRGVRQRP-WGKWAAEIRDPR----RaVRKWLGTFETAEEAARAYDNAAIEFRG 165 6********.**********82....48************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MAFNQQLNFD NSQLHFPASL SPMQSTPLPS ISSRRLSHDQ ENSIIVDALV HVLSGEPKQT 60 APAISFPLAA DLPRCQVCGI GNDGCLGCHF FESTPAEKAE GGGIRERIRR RKKKNQYRGV 120 RQRPWGKWAA EIRDPRRAVR KWLGTFETAE EAARAYDNAA IEFRGARAKL NFPFPDQNST 180 GRQRSAVAAA ADSPLATTVA RGSAEEMGGF WDGLQELIKI DDMEPSDNWM MS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 1e-33 | ERF family protein |