PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 268aa MW: 29590.2 Da PI: 6.3083 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.1 | 7.9e-17 | 27 | 76 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +gr++AeIrdp + r +lg+f+tae+Aa a++ a+++++g XP_020703450.1 27 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEQAAWAYDIAARAMRG 76 69*******.**********93....35999**********************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MEDQNNRTHF KRPAATSATP PPKDAARYRG VRRRPWGRYA AEIRDPQSKE RRWLGTFDTA 60 EQAAWAYDIA ARAMRGLKAR TNFHYPPPHA ATTPQQPPPL PPPPFTSHDF PWPHVSVPTP 120 SPLPPNASLL FRNLITPSST SNVLSSATTE TSSPAVAGSA PAMFYDDCCD FFSPEPPGAG 180 LLQEVIHGFY PKRQNNVVDV SIDVAVKETE PMSFEEMPGP DSIGFGFGFG ENFPTVSEGL 240 LEDIIQYPEF FEMLPSKLHS GRISHTAT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24590.1 | 1e-25 | ERF family protein |