PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020703263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | WRKY | ||||||||
Protein Properties | Length: 277aa MW: 29974.6 Da PI: 8.0332 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.1 | 1.8e-28 | 135 | 193 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+ +++++pr+Y+rC++a +Cpvkkkv+rsa+d+ +++ tYegeHnh XP_020703263.1 135 RDGYQWRKYGQKVTRDNPCPRAYFRCSFApTCPVKKKVQRSADDQCLLVATYEGEHNHY 193 7***************************99****************************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
MESHSLSLDL TIGIAKQSIL QEPSPPPCLQ EELKRVTEEN MKLTSMLATM CESYDALRAQ 60 LIDMIGPTAA VASSEGARSS SPPSAKRKST ESAGDAANSV SSANSCKKAK EEGSKPKIWK 120 LYARTDPSDS SLVVRDGYQW RKYGQKVTRD NPCPRAYFRC SFAPTCPVKK KVQRSADDQC 180 LLVATYEGEH NHYQSSAAEV ENAVSRKTAG TADGVGASGA PETKDSRGER EEARQPELRE 240 RLVKDMASSL TKDSNFTAVI AAAISGRFLG ISTAQEM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 4e-68 | WRKY family protein |