PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020703131.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 398aa MW: 45003.1 Da PI: 6.9776

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020703131.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.4	1.1e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL++k+++++l++ e ik++diyk++PwdLpk+++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ XP_020703131.1 14 MLPGFRFHPTDEELVGFYLRRKIQQRPLSI-ELIKQLDIYKYDPWDLPKMATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSS 107 579*************************.89***********9888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lvfykgra kg ktdW+mhe+rl XP_020703131.1 108 eGTKCIGLKKSLVFYKGRAAKGMKTDWMMHEFRL 141 56667*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEEKNDMDKV DEIMLPGFRF HPTDEELVGF YLRRKIQQRP LSIELIKQLD IYKYDPWDLP 60 KMATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV 120 FYKGRAAKGM KTDWMMHEFR LPSLSDPSVP KRPLDKNFIP ANESWAICRI FKKANTSAQR 180 ALSHSWVSSL PEPTDLDKFS LPRAMNLTHF ASENTSCTTE VGSAIQFGCN SGLEYHSSAV 240 TYPSMDFTNF KSINLSSCKP SEMPSSFMFS PPETSMPIKP SVDMASMLLN LSPTILQDME 300 KSSSPCIDFE QPNQSNGFTV TFPLEANGNL GTDEEDMIAK KTLSSIIGGN NQWGNLRTMN 360 FPFNLASASD DWKLNLLWDS AICPSEMSTG YSTNKCYT

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEEKNDMDKV DEIMLPGFRF HPTDEELVGF YLRRKIQQRP LSIELIKQLD IYKYDPWDLP  60
KMATTGEKEW YFYCPRDRKY RNSARPNRVT GAGFWKATGT DRPIYSSEGT KCIGLKKSLV  120
FYKGRAAKGM KTDWMMHEFR LPSLSDPSVP KRPLDKNFIP ANESWAICRI FKKANTSAQR  180
ALSHSWVSSL PEPTDLDKFS LPRAMNLTHF ASENTSCTTE VGSAIQFGCN SGLEYHSSAV  240
TYPSMDFTNF KSINLSSCKP SEMPSSFMFS PPETSMPIKP SVDMASMLLN LSPTILQDME  300
KSSSPCIDFE QPNQSNGFTV TFPLEANGNL GTDEEDMIAK KTLSSIIGGN NQWGNLRTMN  360
FPFNLASASD DWKLNLLWDS AICPSEMSTG YSTNKCYT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-107	NAC family protein