PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020702795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NAC | ||||||||
Protein Properties | Length: 337aa MW: 37848.8 Da PI: 8.269 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 96.5 | 4e-30 | 4 | 80 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ekewyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s+ + + +glkk+Lvfykgra kg ktdW+mhe+rl XP_020702795.1 4 TGEKEWYFYCPRDRKYRNSARPNRVTSAGFWKATGTDRPIYSSeGVKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 80 5789**************************************944455***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence |
MATTGEKEWY FYCPRDRKYR NSARPNRVTS AGFWKATGTD RPIYSSEGVK CIGLKKSLVF 60 YKGRAAKGIK TDWMMHEFRL PSLNDHSISK RSMDKNFIPA NEAWAICRIF KKTNTAAHRA 120 LSHSWVASLP EATDFHKFSL PYAINVAQFG SENISCAREI GSLIQFGCSS GFEQHTNAVT 180 YPSLDVPTFK PINWINCLSP EMPTTFTFSP QETSNDSKPS IDATSMLPNV SAAVLRDLEK 240 PSPSINFGQP QQSSGFTATF PLEDYRNLGI EEEVMMVKKT TSSMCVSNNQ LGNMRTMNLP 300 FNLEPNPSDE WKPNLPWDSM FFPSEISAGY STNKSDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 2e-69 | NAC family protein |