PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020702794.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 398aa MW: 45257.3 Da PI: 7.1383

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020702794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.4	1.2e-52	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 + pGfrFhPtdeelv +yL++k+++k+l++ e ik++diyk++PwdLpk+++++ekewyf+++rd+ky+++ r+nr+t++g+Wkatg+d++++s+ XP_020702794.1 14 MLPGFRFHPTDEELVGFYLRRKIQQKPLSI-ELIKQLDIYKYDPWDLPKMATTGEKEWYFYCPRDRKYRNSARPNRVTSAGFWKATGTDRPIYSS 107 579*************************.89***********9888999***********************************9 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +glkk+Lvfykgra kg ktdW+mhe+rl XP_020702794.1 108 eGVKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRL 141 44455*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MEENNDMDKV DEVMLPGFRF HPTDEELVGF YLRRKIQQKP LSIELIKQLD IYKYDPWDLP 60 KMATTGEKEW YFYCPRDRKY RNSARPNRVT SAGFWKATGT DRPIYSSEGV KCIGLKKSLV 120 FYKGRAAKGI KTDWMMHEFR LPSLNDHSIS KRSMDKNFIP ANEAWAICRI FKKTNTAAHR 180 ALSHSWVASL PEATDFHKFS LPYAINVAQF GSENISCARE IGSLIQFGCS SGFEQHTNAV 240 TYPSLDVPTF KPINWINCLS PEMPTTFTFS PQETSNDSKP SIDATSMLPN VSAAVLRDLE 300 KPSPSINFGQ PQQSSGFTAT FPLEDYRNLG IEEEVMMVKK TTSSMCVSNN QLGNMRTMNL 360 PFNLEPNPSD EWKPNLPWDS MFFPSEISAG YSTNKSDT

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MEENNDMDKV DEVMLPGFRF HPTDEELVGF YLRRKIQQKP LSIELIKQLD IYKYDPWDLP  60
KMATTGEKEW YFYCPRDRKY RNSARPNRVT SAGFWKATGT DRPIYSSEGV KCIGLKKSLV  120
FYKGRAAKGI KTDWMMHEFR LPSLNDHSIS KRSMDKNFIP ANEAWAICRI FKKTNTAAHR  180
ALSHSWVASL PEATDFHKFS LPYAINVAQF GSENISCARE IGSLIQFGCS SGFEQHTNAV  240
TYPSLDVPTF KPINWINCLS PEMPTTFTFS PQETSNDSKP SIDATSMLPN VSAAVLRDLE  300
KPSPSINFGQ PQQSSGFTAT FPLEDYRNLG IEEEVMMVKK TTSSMCVSNN QLGNMRTMNL  360
PFNLEPNPSD EWKPNLPWDS MFFPSEISAG YSTNKSDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26870.1	1e-108	NAC family protein