PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020702731.2

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 566aa MW: 64687.8 Da PI: 6.0479

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020702731.2	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.9	1.6e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePw+Lp k + +++ ewyfFs+rd+ky++g+r+nrat++gyWkatgkd++v XP_020702731.2 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWELPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATRTGYWKATGKDRKVN 99 79**************************.99**********95334455777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s +++ vg+kktLv+y+grap+g++t+Wvmheyrl XP_020702731.2 100 S-HKRGVGMKKTLVYYRGRAPHGSRTNWVMHEYRL 133 9.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MAPMALPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWE LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATRTGYWK ATGKDRKVNS HKRGVGMKKT LVYYRGRAPH 120 GSRTNWVMHE YRLDESECET ASGLQDAYAL CRVFKKSTPG PKIIEHVGLN QHEEQLQLEA 180 FDLTPDERAD HDDLESSNVY NLFQTHSSLS QSLVHGPSFD ASASWMEHFL AEESSVVSST 240 NVPFPSPSSF SSMLSKVDVA LECARFQNRF LMPPLEVEDL SQLEASNSKI FESGFSQFST 300 TANESFQEIN SVASASHEFC RNPNFDEDMW ALRTSYSFNE FFSPVETTHD LGSPEIIAKP 360 SAMGEKATFV DISELEEEFN LEQKKVENLR NVKMLEGNMI TEINIEFQPS RHQKCSPNPS 420 PAQTSMLVQG DTHGGINDRI INLESQADHD FNPEQKQDFH DNVSSYEGFS SFDVLEKVEF 480 NHGLFVSSKA VAKTLFHHIA PSKKINVHMN LMDFEVRKFK YPSEDGSYKV SFFQKLKEFI 540 CNKIIGIKLG CHLGCILKVC RSIHVW

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MAPMALPPGF RFHPTDEELV AYYLKRKING RKIELEIIPE VDLYKCEPWE LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATRTGYWK ATGKDRKVNS HKRGVGMKKT LVYYRGRAPH  120
GSRTNWVMHE YRLDESECET ASGLQDAYAL CRVFKKSTPG PKIIEHVGLN QHEEQLQLEA  180
FDLTPDERAD HDDLESSNVY NLFQTHSSLS QSLVHGPSFD ASASWMEHFL AEESSVVSST  240
NVPFPSPSSF SSMLSKVDVA LECARFQNRF LMPPLEVEDL SQLEASNSKI FESGFSQFST  300
TANESFQEIN SVASASHEFC RNPNFDEDMW ALRTSYSFNE FFSPVETTHD LGSPEIIAKP  360
SAMGEKATFV DISELEEEFN LEQKKVENLR NVKMLEGNMI TEINIEFQPS RHQKCSPNPS  420
PAQTSMLVQG DTHGGINDRI INLESQADHD FNPEQKQDFH DNVSSYEGFS SFDVLEKVEF  480
NHGLFVSSKA VAKTLFHHIA PSKKINVHMN LMDFEVRKFK YPSEDGSYKV SFFQKLKEFI  540
CNKIIGIKLG CHLGCILKVC RSIHVW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-121	NAC family protein