PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020702561.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 317aa    MW: 34591.5 Da    PI: 5.5893
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020702561.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.37.8e-34163220259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fprsYYrCtsa C vkk+vers++dp+vv++tYeg+H+h+
  XP_020702561.1 163 EDGYRWRKYGQKAVKNSPFPRSYYRCTSALCGVKKRVERSSNDPSVVVTTYEGQHTHP 220
                     8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MMTEKIEEKL DFMTGAISPF SLDAIEPSFG GGFFDLAADI DAGDRGSFGF VDLLGIHDLP  60
QVLLDTESYG ASAAPALESS ETQNFPATPN SSSISSSSSE PSPDADPTMP ASDPPEAEDE  120
SAEHDQAKKM GSSDSKGRKK KGQKRQREPR FAFLTKSEVD HLEDGYRWRK YGQKAVKNSP  180
FPRSYYRCTS ALCGVKKRVE RSSNDPSVVV TTYEGQHTHP SPIIPRGNHH FSAPSPELVD  240
LHRFQLQSSY VLSSQPSNFH PVVTAAPPSL PPPAPRPIPV LGFGERTYCD SATGIGLRDH  300
GLLQDLIPSD VMMKREQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.11e-46WRKY family protein