PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020702372.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | Trihelix | ||||||||
Protein Properties | Length: 847aa MW: 94029.3 Da PI: 8.334 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 59.4 | 8.9e-19 | 756 | 836 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +e++ Li+ r ++++r+++ + +++lWeevs+ m+++g+ r+p qCk+ w +l ++y++ ++ ek r +++pyf+ ++ XP_020702372.1 756 KWKPEEIKWLIKERGDLNDRFQTVRGRMALWEEVSSSMSSHGIIRTPAQCKSLWASLVQKYEESRKDEKFR-----KSWPYFSAVD 836 7*******************************************************************986.....57****9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 847 aa Download sequence |
MASLNVLYSL CNFRLPRRPN LPNNFISCCF GPPALAKGAQ GSKSPRKRSR TDGAGKSMED 60 SIQRKLEQFY EGSNGPPIRV LPIGGLGEIG MNCMLVGNYD RYILIDAGVM FPDYDELGVQ 120 KIIPDTSFIQ RWSHKIEAVV ITHGHEDHIG ALPWVIPALD SHAPVYASSF TMELIKKRLK 180 ESGIFIPSRL KVFKCRKKFL AGPFEVEPLR VTHSIPDCCG LVLRCKDGTI FHTGDWKIDE 240 SPLDGNVFDR EALEELSKEG VTLMMSDSTN VLSPGRTLSE AIVAESLLRH ISSAKGRVIT 300 TQFASNIHRI GSVKAAADLT GRKLVFVGMS LRTYLDAAFR DGKAPMDPST LVKVEEIDAY 360 PPNGLLIVTT GSQAEPRAAL NLASFGGSHS LKLTKDDVIL YSAKVIPGNE TRVMKMFNRI 420 SDLGSTVVMG KNELLHTSGH GYRDELEEVL RIVKPQHFLP IHGELLFLKE HELVGKSTGI 480 KHTAVIKNGE MLGVSHLRNR RVLSNGFALL GKEDLQLMYS DGDKAFGTSA ELCIDERLRI 540 AFDGIIIVCM EILRPQSING SSQACLKGKI RISTRCLWLD KGKLLDALYK AAHAALSSCP 600 VNCPLFHMER IVAEVLRKVV RKYCSRRPEV IAIAVENTVG VLSEELRERI AGKTYDNFDL 660 SAINQLSDMH MRKVSGSRFD EDAPDIMRKL LEAGAEDDDF DVEKSDAEVS LSESEDLEVE 720 NISSVEHLAS SKASGRELMK VSEAKTGSLK SGKRNKWKPE EIKWLIKERG DLNDRFQTVR 780 GRMALWEEVS SSMSSHGIIR TPAQCKSLWA SLVQKYEESR KDEKFRKSWP YFSAVDKILS 840 APQAAAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63420.1 | 0.0 | Trihelix family protein |