PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020702317.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 304aa MW: 34607.9 Da PI: 5.9711

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020702317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.9	2e-09	227	262	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_020702317.1 227 NKWPYPSESEKVALAESTGLDQKQINNWFINQRKRH 262 5679*****************************885 PP
2	ELK	38.4	2.7e-13	182	203	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKhqLl+KYsgyLgsL+qE+s XP_020702317.1 182 ELKHQLLKKYSGYLGSLRQELS 203 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MDDFMFPSII TTQPSSSHLI KDEISFAGAC VPPPVSPADV KARIMAHPHY PNLVAAYAEC 60 HKLGAPPEVA ARLSTVTRDL ETRPGGGRSF PTADPELDQF MEAYYDILVK YKEELSRPFE 120 EAADFLRKAE SQLSSITDLS SMSFHFSTDH EKSGACSAEE DQFEVSLGET VLEGEQAAED 180 RELKHQLLKK YSGYLGSLRQ ELSKKKKKGK LPKEARQKLL SWWELHNKWP YPSESEKVAL 240 AESTGLDQKQ INNWFINQRK RHWKPSEEMQ FMVLDGYQQH QQQNTTFYLE GHFMGDGNLY 300 RIGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	1e-103	TALE family protein