PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020702311.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRF
Protein Properties Length: 563aa    MW: 62208.8 Da    PI: 8.1075
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020702311.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC73.52.3e-23206250145
             WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                     d+e+grCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e 
  XP_020702311.1 206 DPESGRCRRTDGKKWRCSRDAVGDQKYCERHMNRGRHRSRKHVEG 250
                     79****************************************985 PP

2QLQ59.97.1e-21136172137
             QLQ   1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 
                     +aFT++Q+++L++Q+l+yKyLaa++PvP+ L+ +i++
  XP_020702311.1 136 GAFTPSQWMELEQQALIYKYLAAKMPVPSSLVIPIRR 172
                     59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MDSLFYTSFG SNEDFSSACP SLATEPVKQR GDFESGFHSK HERSTVGFEE NDELIHLKMS  60
ETDPMLTTTR KTTPFLLWPN SCSPASNGEK MLTFSSPTPD VMAFSSCEAL PYIRNSGMCY  120
GSSNVSMNGI VPGFRGAFTP SQWMELEQQA LIYKYLAAKM PVPSSLVIPI RRNLNPSGFP  180
SFASGFYRTG ALGCSSFNLA FARNADPESG RCRRTDGKKW RCSRDAVGDQ KYCERHMNRG  240
RHRSRKHVEG HNGHAAKAAM PTPSQSASAV SSCSSNNINS AHQQQIKSLQ SCMEESSPTQ  300
FDRFLMNKGT ESERAQNSQS TSIPTNLCSV FTDTLFPIFK QQTSFEGTIV CADFGLTLPD  360
SPSNPPRSSD PEKLTCMLAP KMQDQQSKSH PLLHFIDDWP KSHSKHSTIT WPDVNEMHTD  420
RMQLSISIPM GSSHYSSSSS SPKKYKLASS SNPLKEGNNR HYSWIPVSWD PMIGGPLGEV  480
LKNKSMITEN NSMNNSSSPL NLLSNGWNSS PRLDSLPTGV LQKTCFVSLP SSTGSSPRVE  540
RHKAHEVDDL GLNVVNLWTI TML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22840.11e-45GRF family protein