PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020702311.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | GRF | ||||||||
Protein Properties | Length: 563aa MW: 62208.8 Da PI: 8.1075 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 73.5 | 2.3e-23 | 206 | 250 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+e+grCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_020702311.1 206 DPESGRCRRTDGKKWRCSRDAVGDQKYCERHMNRGRHRSRKHVEG 250 79****************************************985 PP | |||||||
2 | QLQ | 59.9 | 7.1e-21 | 136 | 172 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +aFT++Q+++L++Q+l+yKyLaa++PvP+ L+ +i++ XP_020702311.1 136 GAFTPSQWMELEQQALIYKYLAAKMPVPSSLVIPIRR 172 59*********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 563 aa Download sequence |
MDSLFYTSFG SNEDFSSACP SLATEPVKQR GDFESGFHSK HERSTVGFEE NDELIHLKMS 60 ETDPMLTTTR KTTPFLLWPN SCSPASNGEK MLTFSSPTPD VMAFSSCEAL PYIRNSGMCY 120 GSSNVSMNGI VPGFRGAFTP SQWMELEQQA LIYKYLAAKM PVPSSLVIPI RRNLNPSGFP 180 SFASGFYRTG ALGCSSFNLA FARNADPESG RCRRTDGKKW RCSRDAVGDQ KYCERHMNRG 240 RHRSRKHVEG HNGHAAKAAM PTPSQSASAV SSCSSNNINS AHQQQIKSLQ SCMEESSPTQ 300 FDRFLMNKGT ESERAQNSQS TSIPTNLCSV FTDTLFPIFK QQTSFEGTIV CADFGLTLPD 360 SPSNPPRSSD PEKLTCMLAP KMQDQQSKSH PLLHFIDDWP KSHSKHSTIT WPDVNEMHTD 420 RMQLSISIPM GSSHYSSSSS SPKKYKLASS SNPLKEGNNR HYSWIPVSWD PMIGGPLGEV 480 LKNKSMITEN NSMNNSSSPL NLLSNGWNSS PRLDSLPTGV LQKTCFVSLP SSTGSSPRVE 540 RHKAHEVDDL GLNVVNLWTI TML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22840.1 | 1e-45 | GRF family protein |