PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020702221.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 199aa MW: 22739.1 Da PI: 9.3431 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 88.4 | 7e-28 | 21 | 70 | 5 | 58 |
ZF-HD_dimer 5 rYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 Y+eClkNhAa++Gg+a+DGCgEfmp +a++lkCa CgCHRnFHRre + XP_020702221.1 21 IYRECLKNHAAAMGGQAFDGCGEFMPG----FKAETLKCAVCGCHRNFHRREIS 70 6*************************8....5678****************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MDFSLVSYIP CPASEELTGG IYRECLKNHA AAMGGQAFDG CGEFMPGFKA ETLKCAVCGC 60 HRNFHRREIS PGHSSFVIHS PAPVAFFPPP DPPFHTFLPP ESPVRRESET PPRRQEGFIR 120 KRYRTKFTTE QKEKMRIFAE KLGWRIQKHD YEALEKFCIQ IGVKRHVLKV WMHNHKNNFS 180 SPSGGERDAN SPPPPFIRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 1e-44 | ZF-HD family protein |