PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020701978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 350aa MW: 39815.2 Da PI: 4.61 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.3 | 1.1e-19 | 113 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++G+r+++ +g+W+AeIrdp++ r++lg+f+t+e Aa+a++aa++k +g XP_020701978.1 113 QFRGIRQRP-WGKWAAEIRDPRK---GERVWLGTFDTPEAAARAYDAAARKVRG 162 69*******.**********954...3************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence |
MCGGALISDF IPSARQRRAT GDYLWADQGK KKKKRNGGRK ISEAEFDDDF EADFREFKDE 60 EGVDELEEFT SVEPYAFRPK PATLSRVEDS AVLKRSEFDG DSDKSSKRKR KNQFRGIRQR 120 PWGKWAAEIR DPRKGERVWL GTFDTPEAAA RAYDAAARKV RGKKAKVNFP DEASKPAQNH 180 PPKQTVSKTL EGNSTEELNF NESLDCFSNA NYNFYSSLGM CEEIIEPMKL EKIYSEQESN 240 SLNCSDYGWE NEFKSPEISS IRAPTVGDLK SGFMEEGGEH KKLKTNSDDD LKFPEDLPAF 300 EPNMKFLPFS EETLDGSLDS LLGTEMIQDG TLNFMDLWNF EDIPISESIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53910.1 | 2e-36 | ERF family protein |