PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020701978.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 350aa    MW: 39815.2 Da    PI: 4.61
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020701978.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31.1e-19113162255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++G+r+++ +g+W+AeIrdp++     r++lg+f+t+e Aa+a++aa++k +g
  XP_020701978.1 113 QFRGIRQRP-WGKWAAEIRDPRK---GERVWLGTFDTPEAAARAYDAAARKVRG 162
                     69*******.**********954...3************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MCGGALISDF IPSARQRRAT GDYLWADQGK KKKKRNGGRK ISEAEFDDDF EADFREFKDE  60
EGVDELEEFT SVEPYAFRPK PATLSRVEDS AVLKRSEFDG DSDKSSKRKR KNQFRGIRQR  120
PWGKWAAEIR DPRKGERVWL GTFDTPEAAA RAYDAAARKV RGKKAKVNFP DEASKPAQNH  180
PPKQTVSKTL EGNSTEELNF NESLDCFSNA NYNFYSSLGM CEEIIEPMKL EKIYSEQESN  240
SLNCSDYGWE NEFKSPEISS IRAPTVGDLK SGFMEEGGEH KKLKTNSDDD LKFPEDLPAF  300
EPNMKFLPFS EETLDGSLDS LLGTEMIQDG TLNFMDLWNF EDIPISESIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.12e-36ERF family protein