PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020701825.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 271aa    MW: 30721.3 Da    PI: 5.0154
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020701825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.3e-1866116155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa a++ a+++++g
  XP_020701825.1  66 CSYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFATALKAAYAYDLAARAMYG 116
                     67*****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MAEPERKQRT RRRRVGPESL AETLEKWKEL NKKLDSCDVK RIRKAPAKGS RKGCMRGKGG  60
PENSKCSYRG VRQRTWGKWV AEIREPNRGN RLWLGTFATA LKAAYAYDLA ARAMYGPGAR  120
LNFSVDQIPS PSESYSSTIT TREETREEAN TELNDWLNLT EDLSCENFDV DEMLRMMDAE  180
PGNTGITTEP DTEDITHCCS PCHMTSPSTL SFQLQNPDAK LLGALDHMEN ETSDTDFSYD  240
FIRPMRQELD YWPPGNPELF DLGFTDGGGL F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40350.11e-35ERF family protein