PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020701573.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 316aa    MW: 35285.8 Da    PI: 5.4203
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020701573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.27e-28106166259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDgy+WrKYGqK++ ++++pr+YYrCt++   gC + k+v+rs+++p v+eitY+g+H+++
  XP_020701573.1 106 DDGYTWRKYGQKDILNAKHPRAYYRCTHSkkqGCLAMKQVQRSDDNPLVLEITYRGTHTCS 166
                     8***************************98899**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MESGTISVLD ELAQVYELAR KLSDNLHQPL QIELCRTITE EIIGSVEKAI CMAKATGGGN  60
GGEPPFSNSA GRQYGDNQQM CKKRKMLPTW TRQVSASTLR GTELPDDGYT WRKYGQKDIL  120
NAKHPRAYYR CTHSKKQGCL AMKQVQRSDD NPLVLEITYR GTHTCSSMVQ LQETDQSLFN  180
QRYSRALVDL QNSFRMKTDG LNIEAKDSTS LIFFPSTPLN PDEDLFCSSP NLESSFLSSF  240
SSPFMSPTTS ESNCLPLSPC QKLSQGNPKA DHTGIISMAT SMTNLTMADM DFMLRTGEMD  300
MDFPIEISNF EWNSAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.27e-39WRKY family protein