PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020701538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 160aa MW: 17799.2 Da PI: 10.3469 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.5e-17 | 32 | 81 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a l+g XP_020701538.1 32 QFRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSTPVAAARAYDTAVYLLRG 81 79*****99.**********9...336*********************998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MKPEMGRKEV GRTPLVPSPP TPPSAGGRRE KQFRGVRMRK WGKWVAEIRE PNKRSRIWLG 60 SYSTPVAAAR AYDTAVYLLR GRSARLNFPE EIEVEEVTND FNSGITAASI RKKASEVGAR 120 VDALQTGVIP PPPPPPPPPS RSWKYPDLNL EPSPETSDEE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67190.1 | 5e-44 | ERF family protein |