PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020701129.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YC
Protein Properties Length: 127aa    MW: 13731.8 Da    PI: 9.8529
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020701129.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC85.94.3e-27181101499
           NF-YC  14 tdfknhelPlarikkilkade..dvk....misaeaPvllskacelfileltlrswlha.eenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                     + +  h+lPl+rikki+k+    +v+    mis eaP++lsk celfi elt rsw  a  + kr+tl + d+a av+ td fdflv +v r 
  XP_020701129.1  18 SRIGPHSLPLTRIKKIMKSSAggNVSdakmMISVEAPIVLSKVCELFIEELTRRSWAAAaAQGKRKTLLHDDVAVAVNDTDNFDFLVGMVSRG 110
                     556679************86422332222389************************8752689************************999886 PP

Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MRRPGVYSGM FTGVDASSRI GPHSLPLTRI KKIMKSSAGG NVSDAKMMIS VEAPIVLSKV  60
CELFIEELTR RSWAAAAAQG KRKTLLHDDV AVAVNDTDNF DFLVGMVSRG GRRRGAEEDS  120
DGVITHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.36e-16NF-YC family protein