PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_020701043.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 28249.1 Da PI: 7.9101 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160 | 9.1e-50 | 12 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 ppGfrFhPtd+el+ +yL+kk++++ +l +i ++d+yk++Pw+Lp+k+ +++ew+fFs+rd+ky++g r+nra++sg+Wka g+dk++ls+ XP_020701043.1 12 PPGFRFHPTDQELIIHYLRKKITASFPPLPAIIGDIDLYKFNPWELPEKALFGQEEWFFFSPRDRKYPNGFRPNRAAASGFWKAIGTDKPILSSg 106 9*************************999899***************8877899***************************************96 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e g+kk Lvfykgr pkg+ktdWvmheyrl XP_020701043.1 107 GSECLGVKKALVFYKGRPPKGVKTDWVMHEYRL 139 66779**************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 247 aa Download sequence |
MECCALQGSR FPPGFRFHPT DQELIIHYLR KKITASFPPL PAIIGDIDLY KFNPWELPEK 60 ALFGQEEWFF FSPRDRKYPN GFRPNRAAAS GFWKAIGTDK PILSSGGSEC LGVKKALVFY 120 KGRPPKGVKT DWVMHEYRLL DNNPSHHLLH KEKGSMRLDD WVLCRVHQKG SFIGENIENL 180 EIRSSKPAII NSNESQGRQA VTNEYEISNY IDWNNPQLLS YCLESSFGGK NNEEILISDS 240 VVGWSQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G61110.1 | 7e-77 | NAC family protein |