PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020701013.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 267aa MW: 29772.2 Da PI: 5.788 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.7 | 1.2e-17 | 66 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y+GVr++ +g+WvAeIr+p+ r r +lg++ t +Aa a+++a+++l+g XP_020701013.1 66 CKYRGVRQRT-WGKWVAEIREPR----RgCRLWLGTYNTSLDAALAYDEAARALYG 116 79*****999.**********83....46***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MAEEERKKRR RNRFTGTSCV AEILSKWKDQ NNQLHTLNTQ RVRKVPAKGS KKGCMTGKGG 60 PENSHCKYRG VRQRTWGKWV AEIREPRRGC RLWLGTYNTS LDAALAYDEA ARALYGSYAR 120 VNLPESVVDS DAQQCKRPKS ETLESTTSSE TALEADNLKP VAVKEEIKNI GSQPSSEDPL 180 STDSRNPVLT EEPVEEMPFD MFHIDEILGF ANGCEDAVGS SLHSSGSNLQ SPSPVQKADT 240 MCWSLDQMDY GFPDLGFLDP SFFSDLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40340.1 | 2e-34 | ERF family protein |