PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020700623.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TALE

Protein Properties

Length: 336aa MW: 37294.8 Da PI: 4.5944

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020700623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.1	1.3e-07	261	294	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+ +e+++L + +gL+++q+ +WF N+R ++ XP_020700623.1 261 WPYPTDDEKAKLVEFTGLDQKQINNWFINQRKRH 294 58*****************************885 PP
2	ELK	27.6	6.6e-10	214	235	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ L rKYsgyL++L++EFs XP_020700623.1 214 ELKEFLFRKYSGYLCNLRTEFS 235 89*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MEDLYCIHPG IPRATIVGSG ELSVGCEGEI RFDGAEIAAD ESGFLEADLT DLIKARIASH 60 PRYSSLLSAY IECNKVGAPP EMATLLEDIA RERSTGRYCG SVGEVGEIGA DPELDEFMDS 120 YCRVLVRYKY ELSKPFDEAV SFLASIESQL SKLCNFSAAA TTSSSSTAFS TAVASTGGAL 180 TFDEAVGSSE EVPSYDDADA LENQVSSSRS PEIELKEFLF RKYSGYLCNL RTEFSKKKKK 240 GKLPREARLT LLDWWNSHYK WPYPTDDEKA KLVEFTGLDQ KQINNWFINQ RKRHWKPSED 300 LQCTIMEGLW GISSGTTLCF ETGSIRSFNL NNSSPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	2e-79	TALE family protein