PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020700572.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 420aa MW: 48344.8 Da PI: 9.1154

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020700572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	161.6	3e-50	12	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 ppGfrFhPtd+el+++yL++kv+++ + ++i+++d+yk++Pw+Lp+k+ ++ ew+fFs+rd+ky++g r+nrat++gyWkatg+dk+++s + XP_020700572.1 12 PPGFRFHPTDQELINQYLRRKVSASLPPQWRIIADIDLYKYNPWELPEKAVFGKGEWFFFSPRDRKYPNGVRPNRATSAGYWKATGTDKPIMSVG 106 9*********************99888899***********87777889**********************************95 PP NAM 97 gel.vglkktLvfykgrapkgektdWvmheyrl 128 g + +g+kk Lvfykg+ pkg ktdWvm+eyrl XP_020700572.1 107 GVQcIGVKKALVFYKGKPPKGIKTDWVMQEYRL 139 5444*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MEGDGMLGSH FPPGFRFHPT DQELINQYLR RKVSASLPPQ WRIIADIDLY KYNPWELPEK 60 AVFGKGEWFF FSPRDRKYPN GVRPNRATSA GYWKATGTDK PIMSVGGVQC IGVKKALVFY 120 KGKPPKGIKT DWVMQEYRLI DSTASSQTQR QLGSMRLDDW VLCRVRQKGA FELLETTSMV 180 NTQVHEEKEV VEKERRSSEG EWSEHLSYFA ESVPEDGENS GEDSTGIMWN SSDYSGQDGY 240 SVVEEKQQPL QLAAAAAIYP YKRKQSHSFL DDFLLLQPSK RLQCTSDARL SPAESVYDNG 300 IFSQHLKKGQ NNYMALIDER LLRAKIEHRE RISFVSVNSK STVVVFTETN RMILCVRFPH 360 FYMFSLLLER EVRLFMSKWY QSELFLGTMA EGSRKNMFPQ HSSRFRSFVG SASQHHTASR

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MEGDGMLGSH FPPGFRFHPT DQELINQYLR RKVSASLPPQ WRIIADIDLY KYNPWELPEK  60
AVFGKGEWFF FSPRDRKYPN GVRPNRATSA GYWKATGTDK PIMSVGGVQC IGVKKALVFY  120
KGKPPKGIKT DWVMQEYRLI DSTASSQTQR QLGSMRLDDW VLCRVRQKGA FELLETTSMV  180
NTQVHEEKEV VEKERRSSEG EWSEHLSYFA ESVPEDGENS GEDSTGIMWN SSDYSGQDGY  240
SVVEEKQQPL QLAAAAAIYP YKRKQSHSFL DDFLLLQPSK RLQCTSDARL SPAESVYDNG  300
IFSQHLKKGQ NNYMALIDER LLRAKIEHRE RISFVSVNSK STVVVFTETN RMILCVRFPH  360
FYMFSLLLER EVRLFMSKWY QSELFLGTMA EGSRKNMFPQ HSSRFRSFVG SASQHHTASR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	2e-73	NAC family protein