PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020700534.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 311aa    MW: 34278.3 Da    PI: 5.185
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020700534.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.93.8e-21151201256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+ge
  XP_020700534.1 151 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAAMAYDKAAFRLRGE 201
                     59******9.**********965...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MAAAIDMYNS MLDVSYDNLL SKELTEALEP FINGVSSSPS AFFPFCAPSS TTKVISFDSS  60
PASLPPFPSS LSSYQFSYPS PNPSFDRSVP SNWNQHDSLI SDSPIGLTQL GPIQIQQIQA  120
QLHRHHNHHP LAPRSQPMKL SAESPAKPPK LYRGVRQRHW GKWVAEIRLP KNRTRLWLGT  180
FDTAEEAAMA YDKAAFRLRG EFARLNFPHL QHGGGAGGEL HSSVDAKLEA ICESLASSQK  240
QGSASSLTPV AAAEVKSEPE VSSEGEISSE GSSPVSEMEN LDFTEVPWDE SEMFVLRKYP  300
SWEIDWDSIL S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.12e-53ERF family protein