PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699934.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | G2-like | ||||||||
Protein Properties | Length: 292aa MW: 31584.7 Da PI: 7.0558 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.8 | 1.6e-30 | 96 | 149 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl XP_020699934.1 96 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 149 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.4e-15 | 98 | 148 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ XP_020699934.1 98 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 148 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 292 aa Download sequence |
MIEEEEPNWL TRREELPRPE ELMPLYQSLI TPDLALAFDI LTPNPSAAPG LNAHDTAANH 60 HPAQALLGVP DFESPNHSSP AGSGSGGNEL ARTLKRPRLV WTPQLHKRFV DAVAHLGIKN 120 AVPKTIMQLM SVDGLTRENV ASHLQKYRLY LKRMQGLSSA GPPCPMSAAD AATEQLFAST 180 PIHNPFLARG ASGTGQESFM QFMAPPLLQH HQHIAAAASL AQQRFYHQTQ HFGSPMATGV 240 GYDYGFPTMT GGSGLGMRHS SPLAVPPNSY GEGIDSGSRR RVLTLFPSGS ED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40970.1 | 3e-52 | G2-like family protein |