PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699809.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | ERF | ||||||||
Protein Properties | Length: 213aa MW: 23769.4 Da PI: 4.7686 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.2 | 8.3e-18 | 40 | 90 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ykGVr + grWv+e+r+p +k+ r++lg+f t+e+Aa+a++ a+++l+g XP_020699809.2 40 PVYKGVRLRG-AGRWVCEVREP---NKKSRIWLGTFPTPEMAARAHDVAALALRG 90 68*******9.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MDTVIDELFF EEDEEEYATV SSAPPKRRAG RTKFRETRHP VYKGVRLRGA GRWVCEVREP 60 NKKSRIWLGT FPTPEMAARA HDVAALALRG RQACLNFADS ARLLPIPPAP ASPRSIQRAA 120 AMAAEAFRPR PDHEQQEEAP PSDQTHTEPE SSTAQDDAFS DVMDFDGYNY YADMLSTDSS 180 MYFPTGLTAA GGGVFGWDDG EWRGDMPLWS HSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51990.1 | 6e-34 | ERF family protein |