PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020699440.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 308aa    MW: 35236 Da    PI: 6.4047
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020699440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1782.6e-55251511129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL +k  + +++   +i e+d++k+ePwdLpk++k ++kewyfF+ +d+ky+tg r+nrat++gyWkatgkdke+++ 
  XP_020699440.1  25 LPPGFRFHPTDEELITHYLSNKFLDARFRS-LAIGEADLNKCEPWDLPKQAKLGDKEWYFFCVKDRKYPTGLRTNRATEAGYWKATGKDKEIYR- 117
                     79*************************999.67***************99999*****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ lvg+kktLvfy+grap+gekt+Wvmheyrle
  XP_020699440.1 118 GKLLVGMKKTLVFYTGRAPRGEKTSWVMHEYRLE 151
                     999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEKIEVSISD GFDNSNTGTE DQMQLPPGFR FHPTDEELIT HYLSNKFLDA RFRSLAIGEA  60
DLNKCEPWDL PKQAKLGDKE WYFFCVKDRK YPTGLRTNRA TEAGYWKATG KDKEIYRGKL  120
LVGMKKTLVF YTGRAPRGEK TSWVMHEYRL EGKYAINGLY RAAKNEWVIC RVFKKSSLGN  180
PFGMGKMASS SYGEEVEDSP PPPKTLPPLM DIPSHVPCFS NGMEGQKAHE QDMSSIFSKF  240
IPMSTALYDG SFMSLFESHG FEEKQGCKKN REMLSFSEQT ELIAEMNTEI YCDNEIGRSS  300
FEHCLWNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.13e-98NAC family protein