PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_020699194.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MIKC_MADS
Protein Properties Length: 242aa    MW: 27796.8 Da    PI: 9.7423
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_020699194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF100.28e-32958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ 
  XP_020699194.1  9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58
                    79**********************************************95 PP

2K-box109.14.9e-3677171599
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     + +++ +++++s++qe++kLk++ e+Lqr++RhllGedL++L++keLqqLe+qLe +l++ R++K++++l+q+eel+kke++l e+nk+L++kle
  XP_020699194.1  77 QATNTIDRETQSWYQEVSKLKAKFESLQRSHRHLLGEDLGPLNVKELQQLERQLEAALSQARQRKTQIMLDQMEELRKKERQLGEINKQLKMKLE 171
                     556677899************************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSA  60
GTCKTLERYQ RSSFSSQATN TIDRETQSWY QEVSKLKAKF ESLQRSHRHL LGEDLGPLNV  120
KELQQLERQL EAALSQARQR KTQIMLDQME ELRKKERQLG EINKQLKMKL EAGSGSLRLI  180
QGSWESDAVV EGNAFQMNPY QSSGMECEPT LHIGYHQFVP PETVIPRTPG VENNNFMLGW  240
ML
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.19e-87MIKC_MADS family protein