PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699092.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 127aa MW: 15013 Da PI: 5.7503 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 104 | 1e-32 | 29 | 127 | 1 | 96 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++ w++ ie+++ fkn +l l+ ikki+ +dedv+mi ea v+++ a e+filelt r+w hae+nk +tl+k+di aa+ +td +fl XP_020699092.1 29 QLRTLWADMyreIEQMKIFKNMNLSLTTIKKIMETDEDVQMIDDEALVVFACAYEMFILELTHRAWTHAEKNKHQTLQKNDIVAAIRQTDRLEFL 123 7899998765569********************************************************************************** PP NF-YC 93 vdiv 96 div XP_020699092.1 124 EDIV 127 **87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MDQQNHNTPQ ANGDITGAHL CHHHHQQQQL RTLWADMYRE IEQMKIFKNM NLSLTTIKKI 60 METDEDVQMI DDEALVVFAC AYEMFILELT HRAWTHAEKN KHQTLQKNDI VAAIRQTDRL 120 EFLEDIV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 8e-35 | NF-YC family protein |