PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699089.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 198aa MW: 22280.3 Da PI: 10.5975 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 62.1 | 1.1e-19 | 17 | 77 | 39 | 99 |
NF-YC 39 isaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 + e+Pv+ +ace+fi elt ++w ha++++r+t++k di aa ++t dflvd+ ++ XP_020699089.2 17 AAKETPVICERACEMFIQELTEKAWAHAQKSNRQTIEKRDIVAAAKETGHCDFLVDRKRKN 77 5679****************************************************98765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MDRKGHKKPL PPQHAAAAKE TPVICERACE MFIQELTEKA WAHAQKSNRQ TIEKRDIVAA 60 AKETGHCDFL VDRKRKNHRG AHGASSSTAI PGDPLDPPEP RYHDESNMFK GVPPLSSREF 120 RPSHLVRHRV RRHRALSRAA HRPELVRRPE PTFRDPTSSG RAMPSISIAL SLQSRTPVIP 180 SSSAVDPGVH YRCFDFEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 4e-15 | NF-YC family protein |