PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020699062.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | NF-YC | ||||||||
Protein Properties | Length: 161aa MW: 18175.4 Da PI: 4.2502 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 114.3 | 6.3e-36 | 43 | 142 | 3 | 99 |
NF-YC 3 ksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvd 94 + +w++q +e++tdf+++++Pl ik+i+ adedv ++s eaPvll++ace+filelt + w ha++ rrt+kk di aav++td dflv XP_020699062.1 43 RCYWADQyreMEETTDFEKQRIPLGTIKRIMMADEDVDIVSNEAPVLLARACEMFILELTHKGWAHADQRCRRTIKKEDIIAAVNETDYCDFLVP 137 579*999999************************************************************************************9 PP NF-YC 95 ivprd 99 ++ ++ XP_020699062.1 138 TITTE 142 88776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
MDGQGHNRPP PPSGDVPHLP NFAADADPNL YPEQVVHQPQ PGRCYWADQY REMEETTDFE 60 KQRIPLGTIK RIMMADEDVD IVSNEAPVLL ARACEMFILE LTHKGWAHAD QRCRRTIKKE 120 DIIAAVNETD YCDFLVPTIT TEEPTEPDSF ELATGPADLL S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-35 | NF-YC family protein |