PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_020699015.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

Dof

Protein Properties

Length: 484aa MW: 52537.9 Da PI: 6.8256

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_020699015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.8	6.5e-40	121	181	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk++ XP_020699015.1 121 PDKLLPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRRKNKHTG 181 78999*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MSEGRDPAIK LFGRKIPLQE GQTRMDEGDV ADSGSAAEPP PPPLEEKDTC KEKAKIEVAN 60 KLGAPGELDP KKALDSSVLN NSSVVVEESS TESAKPVEET QPEQDHKEAD IAGQDKLLKK 120 PDKLLPCPRC NSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGSMRNVPV GAGRRKNKHT 180 GSGYRHTVIT PDSLPSVQVD GPDLIDPKPL SPFKVNGTIL KFGPEAPLCD SMASILNLGE 240 QNLASQLDFT TGAENREETS CSSACKPKEN GFPEKTQQNP MNSYCNGITP LPQIQYFPGP 300 PWASHWNPGW NNFAAAMAAT GCSPELLPVQ DNGILWHQPA LITSSFCPHP PLPFPFISPS 360 FWGWTGGPWN LPWLGSSNGV SLSSSKSTSY CSGNGSPTLG KHSREEKTEK SLWIPKTLRI 420 DDPDEAAKSS IFATLGIKHD EVSKFKAFSS SNGNGKGDSS KTALALHANP AALSRSRSFQ 480 EIIS

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MSEGRDPAIK LFGRKIPLQE GQTRMDEGDV ADSGSAAEPP PPPLEEKDTC KEKAKIEVAN  60
KLGAPGELDP KKALDSSVLN NSSVVVEESS TESAKPVEET QPEQDHKEAD IAGQDKLLKK  120
PDKLLPCPRC NSMDTKFCYY NNYNVNQPRH FCKNCQRYWT AGGSMRNVPV GAGRRKNKHT  180
GSGYRHTVIT PDSLPSVQVD GPDLIDPKPL SPFKVNGTIL KFGPEAPLCD SMASILNLGE  240
QNLASQLDFT TGAENREETS CSSACKPKEN GFPEKTQQNP MNSYCNGITP LPQIQYFPGP  300
PWASHWNPGW NNFAAAMAAT GCSPELLPVQ DNGILWHQPA LITSSFCPHP PLPFPFISPS  360
FWGWTGGPWN LPWLGSSNGV SLSSSKSTSY CSGNGSPTLG KHSREEKTEK SLWIPKTLRI  420
DDPDEAAKSS IFATLGIKHD EVSKFKAFSS SNGNGKGDSS KTALALHANP AALSRSRSFQ  480
EIIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	9e-64	Dof family protein