PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_020698786.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 289aa MW: 32741.9 Da PI: 5.8731 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.9 | 7e-18 | 74 | 127 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_020698786.1 74 KKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 127 456899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 129.7 | 1.2e-41 | 73 | 163 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqv++LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++da+k++n+ L++++++L++e+ XP_020698786.1 73 EKKRRLNMEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDAIKADNDVLQNQNKKLQAEI 163 69**************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MMSMHMASCN GLSSSSPFFP PNFILQMQST NSEHDHFPPP LNPQDFSSRG MPAMVEACEG 60 EEDLSDDCSQ PGEKKRRLNM EQVRTLEKNF ELGNKLEPER KMQLARALGL QPRQIAIWFQ 120 NRRARWKTKQ LEKDYDLLKR QFDAIKADND VLQNQNKKLQ AEILALKGRE APELINLNKE 180 TEGSCSNRSE NSSEINLDIS RTSTTATAAT VTAVVSESHL NHPIQNIPFF SVIRPPAITQ 240 LLPSSSRPDL QCTKIEHGTV VADENFSNLL CGMDEQNAFW PWPDNHNLH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 122 | 130 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 4e-83 | HD-ZIP family protein |